CDS
| Accession Number | TCMCG019C12096 |
| gbkey | CDS |
| Protein Id | XP_022943176.1 |
| Location | join(473640..474155,474838..476723,476807..477749) |
| Gene | LOC111447986 |
| GeneID | 111447986 |
| Organism | Cucurbita moschata |
Protein
| Length | 1114aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA418582 |
| db_source | XM_023087408.1 |
| Definition | RNA-dependent RNA polymerase 1-like [Cucurbita moschata] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGGTAAAACAATTCAGCTTTATGGATTCCCTTCTGGTGTATTACAAGAATCGGTTAAGGCGTTTGTAGAGAGATTTACAGGCGAAGGAAGTATAGATGCCATAAATGTAAAACGTTCAAGGGGAAGAGGAAAGCGATTGTATGCAATCATCCAGTTTATTGACGATGTAGGTGCTAAGTTAATTATATCTTTGGCTAATGCAAGCCTCCGCTATGGAACTTCTTATCTGAAGGCAAGGGAGTGGAAGCAGGATATTCTACAAGATCCACTAGTCTTTGAATACAATTTCAAAGGCTTAGAACTCCATCTTGGTTGTCAGATATCAAGGGAGGAATTTTTTGTGTTATGGAGAGAGTCAAATGTGTCTGTGAATTTCGAGTTTGAGCGGCGTGATCTTAAGTTTTTCATATCCCATCCTCGTGTTGACTACATGCTCGTATTGCGATATGAGAACATTTGGCAAGTTGAGCTACACAAGCCACAAGGACAATCTATAGATTATCTTCTGATTCAGTTAGTTGGTGCTCCGCGGATTTATGAGAGAGATACAAAGCTTTTTGGACATATTTCTGAAGACCCCTTCTTGAGCTTTTCTAAGGAAATGGACACCAAATGGTTTCGAGCAACCGATTTCACTCCATCATGCTGTATTGGACAATCTGGAGCTTTATGCTTGGAGATTCCTTACGGTCGCCTGCTCCCTAATTTTCACGATAAATTTGCTTACTTCAACGAAATAAAGGGTAAATTTACACTGGCCAGCGGCTCTACTTATTCGTCCAATGTAAACTTGGTACCTGTAGTTAGACCTCCTCTGAGCATCCACTTGCCATATGCCATTTTGTTTAAGATAAACTTGTTGGTACAACAGGGGTGTCTTCCAGGCCCATCTCTTGATATCAGTTTCTATGAGATGGTTGATCCTCAGATACACAATATTGCCTTCATAGATCGTGCTTTAAGGAAACTTTATGACTTGAAAGAGTGTTGCTATAACCCTTCAAAATGGTTAGGTGAGGAGTACAGGAAGTACTCCAAGTTAACGAATCCGCCCCAGCCACCTAACTTGTCCTTAGATGAAGGGTTAGTCTATGTACACAGGGTTCAAGTGACACCTTGTAGAGTGTACTTTTGTGGTCCAGAGGTTAATGTTTCAAATCGTGTATTGCGTCGTTATCCCGAATATCTTGACAACTTTTTGCGTGTTTCGTTTGTCGACGAGGAATTGGATAAACTGTATTCAACTGAATTGTCTCCACGAGAATCTTCTTCCTTGGAGGATGGAAAGACGAAAATATTTAAAAGAATCCTTTCAGTTCTGAAAGATGGCATTACCATTGGTGATAAGAAGTTCGAGTTTCTTGCGTATTCTTCGAGTCAATTACGGGAAAATGCCGTGTGGATGTTTGCTCCAAGAGATGGGATTACTGCAGCTAAAATAAGGAAATGGATGGGAGATTTTCATAGTATAAGAAATGTAGCCAAGTATGCTGCTCGACTAGGCCAATCCTTTGGTTCATCCACAGAAACAGCAAGTGTCAGTCGACGCGAAGTCAAGGTTATTCCTGATATCGAGGTCAAATCAGATGCTGGTATCAATTATGTCTTCTCTGATGGGATTGGGAAAATATCAGCTAGTTTTGCTAGAGAAGTGGCTAGAAAATGCCACATCAGGCATACACCATCTGCTTTTCAGATTCGTTATGCTGGTTTTAAAGGTGTTATTTCGGTCGATCCAACCTCATTCGTAAAATTATCGCTCAGGAACAGCATGCTAAAGTATGAGTCGACCGACACGAAGCTCGATGTCTTATCTTGGAGTAGATATCATCCGTGTTATCTTAATCGTCAGTTGATTACTCTTTTGTCTACACTTGGAGTTCAGGATGATATCTTTGAGAGTAAACAAAAGGAATTGATAGATCAATTGGACACCATTTTTATGGATCCATTGAAGGCTCAGCAGGCCCTTGAGCTAATGTCTCCAGGTGAGAATACCAACATTCTGAAGGAAATAATCTCGTGCGGTTACCGACCTGATTCCGAACCTTTCTTATATATGATGTTGCATACGTTCCGAGAATCGAAGTTGTTAGAATTGCGGAGAAAATCTAGAATCTTTATCCCAAATGGAAGAGCAATGATGGGATGTCTTGATGAAACTGGAAACTTAGAATATGGAGAGGTATTTGTGCAGTGTTCTGCTCACCAGCAGCTGCATAATGATCATATTATCTTTAAAAGAAGCAAATCAAATCAACATTTCATCGTAACAGGAACGGTAGTCGTGGCGAAGAACCCGTGCTTGCACCCAGGTGACGTGCGTGTCTTAACCGCTGTGGATGTACCATCTCTACATCACATGGTAGATTGTCTGGTTTTTCCACAGAAGGGACCAAGACCTCATCCGAATGAATGCTCGGGAAGCGATCTCGATGGCGATATATACTTCGTGTGCTGGGATCCTGATTTGATTCCACCTCAACAAGTTGAACCAATGGATTATACCCCCGTGCCTAGCAGATTACTAGATCATGATGTCACAATGGAGGAAGTTCAAGAGTATTTTGCAAATTATATGGTCAATGACAGTCTAGGAATCATTGCCAATGCTCATACAGCATTTGCAGATAGTAGGCCAGAGAAAGCAATGAGCGAACCTTGTATAAAGCTTGCAAAACTGTTCTCAATTGCAGTGGACTTCCCCAAAACTGGCGTTCCTGCTTTGATATCTGCTGATCTAAGAGTACAAGTATATCCTGATTTCATGGACAAACCCGACAAACAGAGCTACAAGTCACATAATGTACTGGGGAAGCTGTTCAGAATGTTGGATGACATTGAACCAAGGATTAGCATCAAGTCCGTGAAGTTTACTCGGGAGATAGCTCGGCAAGCTTATGACCCCGACATGGAAGTCAAAGGCTTCGAGGAGTACCTCGACGATGCGCTTTATCACAAGAACAATTACGACATGAGGTTGGGGAATTTGATGAAATATTATAAGATCAAAACTGAGGCAGAGCTAATCAGTGGGGTTAGTTTGACAAAATCATCTTCTTTTACTAAGAAAAATGAAGCGGAATCTATCATCATGGCTGTGAAGTCCCTGCGAAAGGAGGCGAGGGGGTGGTTCAATGAGAATGCTGGCTTGCATTTTGGACATGACAATAATGCGTATGCTAGAGCTTCAGCATGGTATTTTGTTACATATCATTACAGCTACTGGGGCTGGTATGGGGAGAAGAATGAAAGCCATTTTCTCAGCTTTCCATGGTGTGTTTACGACAAGCTCATCCGTATCAAGAAGCGCAAGATTGGTGCTCGAGCTCGCCATCGGTAA |
| Protein: MGKTIQLYGFPSGVLQESVKAFVERFTGEGSIDAINVKRSRGRGKRLYAIIQFIDDVGAKLIISLANASLRYGTSYLKAREWKQDILQDPLVFEYNFKGLELHLGCQISREEFFVLWRESNVSVNFEFERRDLKFFISHPRVDYMLVLRYENIWQVELHKPQGQSIDYLLIQLVGAPRIYERDTKLFGHISEDPFLSFSKEMDTKWFRATDFTPSCCIGQSGALCLEIPYGRLLPNFHDKFAYFNEIKGKFTLASGSTYSSNVNLVPVVRPPLSIHLPYAILFKINLLVQQGCLPGPSLDISFYEMVDPQIHNIAFIDRALRKLYDLKECCYNPSKWLGEEYRKYSKLTNPPQPPNLSLDEGLVYVHRVQVTPCRVYFCGPEVNVSNRVLRRYPEYLDNFLRVSFVDEELDKLYSTELSPRESSSLEDGKTKIFKRILSVLKDGITIGDKKFEFLAYSSSQLRENAVWMFAPRDGITAAKIRKWMGDFHSIRNVAKYAARLGQSFGSSTETASVSRREVKVIPDIEVKSDAGINYVFSDGIGKISASFAREVARKCHIRHTPSAFQIRYAGFKGVISVDPTSFVKLSLRNSMLKYESTDTKLDVLSWSRYHPCYLNRQLITLLSTLGVQDDIFESKQKELIDQLDTIFMDPLKAQQALELMSPGENTNILKEIISCGYRPDSEPFLYMMLHTFRESKLLELRRKSRIFIPNGRAMMGCLDETGNLEYGEVFVQCSAHQQLHNDHIIFKRSKSNQHFIVTGTVVVAKNPCLHPGDVRVLTAVDVPSLHHMVDCLVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSRLLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADSRPEKAMSEPCIKLAKLFSIAVDFPKTGVPALISADLRVQVYPDFMDKPDKQSYKSHNVLGKLFRMLDDIEPRISIKSVKFTREIARQAYDPDMEVKGFEEYLDDALYHKNNYDMRLGNLMKYYKIKTEAELISGVSLTKSSSFTKKNEAESIIMAVKSLRKEARGWFNENAGLHFGHDNNAYARASAWYFVTYHYSYWGWYGEKNESHFLSFPWCVYDKLIRIKKRKIGARARHR |